Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MAQVQDPTFWGGNIAFWIQTLVFFIS--ALIAIYTLRRNEAQAKK-RATVDLVLSETQDMYFRDIKEKFG-KYK-----
3L9A Chain:X ((9-88))RDFFVITNSEYTFAG--VHYAKGAVLHVSPTQKRAFWVIADQENFIKQVNKNIEYVEKNASPAFLQRIVEIYQVKFEGKNVH


General information:
TITO was launched using:
RESULT:

Template: 3L9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 241 10905 45.25 160.36
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain X : 0.68

3D Compatibility (PKB) : 45.25
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.103

(partial model without unconserved sides chains):
PDB file : Tito_3L9A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9A-query.scw
PDB file : Tito_Scwrl_3L9A.pdb: