Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLIQPELFFSALSPAEQRIQQALEDIRQGKPVLVMDDFDRENEADLIVAAETLTVETMVRMIHDGSGIVCLCLTEELADHLELPPMVSQNSSQFHTAFTVTIEAAQGVTTGVSAKDRVTTIKTAIKDGAVASDLNRPGHVFPLRARNGGVLTRRGHTEGTIDLARLAGLKPAGVLCELTNPDGTMASGIQVLAYAQTHHLTVITIEELVQYRQQHGI
4FFJ Chain:A ((4-199))------------------RKIQEALEALQKGRLVLVIDDKD--NEGDLICSAQAATTENVNFMATYAKGLICMPMSESLANQLMLSPMVE-------TAFTVSIDYKE-TTTGISAEERGLTARMCVAEDITPSDFRRPGHMFPLIAKKGGVLERNGHTEATVDLLKLAGLKECGLCCEIMNHDGKMMRTDDLIQFSKKHNIPLITIKELQEYRK----


General information:
TITO was launched using:
RESULT:

Template: 4FFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1058 -137505 -129.97 -735.32
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -129.97
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_4FFJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FFJ-query.scw
PDB file : Tito_Scwrl_4FFJ.pdb: