Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequence---------MKNKNIGCWLLLAGSSSVCAMQPLDDQSLAAATGQNGLTLGIQADQVKFNQVALIDTNGIASTSYNSKAGLIIAGNSTNPVPGIEFIKAAVSTNPSFNIAIDTDAGGGNPFLNLAVTMGSDVNGIRLLPFSVYLAPSTSLPSPSDYALTSYAPKSIFSSGTTVNTGVKELIRS----TGNLDINFVQTNKPRLNIQLGHAAQSVMVKFGGAIQSICSAASGCPITLV-SDNTGATFGFKFAGTNASTGFVL--DGFYAGVDPTGLTI----GNIGVSSKFDASLNNVTLGNLGTQSTTTFNNLPNG---SMGSFGVTGASVTDFKMKVSGF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5MQP Chain:A ((24-623))AGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPVFIRPED--SGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMVTTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEHNEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFYLYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLK


General information:
TITO was launched using:
RESULT:

Template: 5MQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1612 61428 38.11 195.01
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 38.11
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.194

(partial model without unconserved sides chains):
PDB file : Tito_5MQP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MQP-query.scw
PDB file : Tito_Scwrl_5MQP.pdb: