Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MRQKNMFLNIFMVLLVLIAASFVISLFVSVLSGLLWFAVKVLIPIALIIWLVRWIKGNTHRKNYY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4ZMU Chain:A ((5-345))MLACPLPPDEALRQQALD----DMALVDTPAEHYLDALVELARETF--GVKTVL-ISLIDHDRQWFKARIGLDAEQTPRDLSFCGHAILASEPLMVTDASRDPRFHDNPLVTGPPFIRFYAGEPLHASNGQAIGTLCLIDPSPRLLDLREGRQLNRLSILAEGYLQLRSLTEHTRFLRQEIDREQRKSLLDPLTQLWNRAGFHALHQHELELARASDQRIGIIYSDIDHFKRINDTLGHRAGDSVLREAASRLRAALRPEDLLARFGGEEFVAMVRVRETTELTMIANRIRELMEATPIDCAGTSVPVTISAGCTLAGSGEEPERALARADAALYDAKRAGRNRVVSV


General information:
TITO was launched using:
RESULT:

Template: 4ZMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 89 -1701 -19.11 -29.32
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -19.11
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_4ZMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZMU-query.scw
PDB file : Tito_Scwrl_4ZMU.pdb: