Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRRKQGMPTINQLVRKPRKSKVEKSNSPALNKGYNSFKKTQTNVNSPQKRGVATRVGTMTPKKPNSALRKYARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIVRGALDTAGVNDRKQSRSKYGTKKPKA
4KHP Chain:L ((1-122))--------PTINQLVRKGREKVRKKSKVPALK-------------GAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK-


General information:
TITO was launched using:
RESULT:

Template: 4KHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 504 -24684 -48.98 -202.32
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain L : 0.88

3D Compatibility (PKB) : -48.98
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4KHP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KHP-query.scw
PDB file : Tito_Scwrl_4KHP.pdb: