Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFITKRRCKQMDLNKRQLQILVVLRNKNHWITSEELAEALGTNKKTIQTEIKNMLAIYEKKIIIQSNKRSGYFLESIESETKQQIIQEVTKHKIYSSMDFRASTIVTYLLFQKGYVSMQKIADIFFLSKTAVSLQIKTILRWIERNPKLELEVSSTKGLKIIAEENSKRIFLSLVGTETVIQHARFPQQISTIFSNIMPTVQKTLKEVLISYNYIVSGEDFIRFSRYLVLTILRREELLEKTNRYTLFIPMVETLTKKLSSELPYSFSNQEKQAIENRLLELNYLMINDEKNKEIEKNLRAFEQTIIRFLDLPVSLLFHETEFLLTHIKQMKTRMDAGHNTMNHFVQKIISRYPLEIYLIRRFFPIHFQLRPNLAESAYFVLYLAEALNPFRKQGEILIVSNQPISILNTLKKQIQQSMNMWIKEC---RIEPVYLFKNQSNKITEYDAILTTEQEL-IFEWDDLIYLPSVLDEFESWEIYQILREKLTIVEEKKKTKLLDHYYKEENQIKIHKKIDSIQQLISPSSDLVMLPLNAETLLCCLIKSQVETKITEYQLEIPLIHQQRKIKRVFFVSFDYKRNDILVFFQAVSDLLG
1TVM Chain:A ((20-111))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKRKIIVACGGAVATSTMAAEEIKELCQS-HNIPVELIQCRVNEIE---TYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTIL-----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1TVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 308 -28474 -92.45 -323.57
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -92.45
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_1TVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TVM-query.scw
PDB file : Tito_Scwrl_1TVM.pdb: