Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAESEEEFFMGLIKAATSMVGGGLADQWLEVIEPDNMSDTTVMTKGVKVRKDDKRGSNRKGTEDVLTDGTVVHVYPNMMMLLVDGGKIIDYTAEEGYYTIKNDAAPSMFNGTLKEAIAETFDRFKFGGVTPQKQQVFYINLQEIKGIKFGTSAPLNYFDNFYNAELFLRAHGTYSIHVVDPILFYTNAIPKNKTQVEINDINEQYLAEFLTALQSAINQMSADGQRISYVPSKSLELSKYMDTALDDSWRELRGMEIVSVAVASISYTDDSVKLINMRNEGAMLGDPSVREGYVQGSIARGMEAAGKNEAGAMTGFMGVGMGMNANGSYLSQAAQNNQEQIKQQAEKQNQQTAQGNADTWTCPVCGTENSGKFCSNCGAAKPVENVQPKLQMRCSECNEIVDLSNGIPKFCPNCGKPFKGIPVN
4FVF Chain:B ((4-120))---------------------------------------------------------------------------------------------------------------------------------------DSLIKVDMRTISF-DIP-PQEV--LTKD---SVTISVDGVVYYRVQNATLAVAN-IT---------NADSATRLLAQTTLRNALGTK-----NLSQILSDREEIAHHMQSTLDDATD-DWGIKVERVEIKDVKLPVQLQR-------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 466 -60539 -129.91 -517.43
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -129.91
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_4FVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FVF-query.scw
PDB file : Tito_Scwrl_4FVF.pdb: