Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLSMNLQLFAHKKGGGSTSNGRDSESKRLGAKRADGQTVTGGSILYRQRGTKIYPGVNVGIGGDDTLFAKVDGVVRFERKG-RNKKQVSVYPVAQEA
5GAH Chain:X ((10-82))------------------TRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISI-------


General information:
TITO was launched using:
RESULT:

Template: 5GAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 258 -12046 -46.69 -167.31
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain X : 0.77

3D Compatibility (PKB) : -46.69
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_5GAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAH-query.scw
PDB file : Tito_Scwrl_5GAH.pdb: