Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKEMLNALDALEAEKGISKEIVIDALEAALVSAYKRHYGQAQNVEVEFDQKKGKI-HVYAVKEVTEEVMDSQLEVSLKDALLINPAYEIGDTIRFEVTPKDFGRIAAQTAKQVI-LQRVREAERTIIYNEFSAYEKDIMQGIVERQDKRYIYVNLGKIEAVLSKQDQ-MPNEFYQPHDRIKVYVSRVEN-TSKGPQVFVSRSHPDLLRRLFEQEVPEVYDGIVEIVSIAREAGDRSKVAVRSNDPNIDAVGTCVGPKGQRVQAIVNELKGENMDIVEWNEDPAVFIANAL-NPAQVMDVIFDE-TNPKACTVVVPDYQLSLAIGKRGQNARLAAKLTNHKIDI-KSESDMTEFYENQEQQKE----TEELHDEAIVQSDLTDDEYETIA---------FNNETVEEKPEA---------------------------
4MTN Chain:A ((5-406))-GNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVKTNGREIDRDELGDILG-----------------------------RISAQTKQ--VMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEGSAITVNIGKAEAILPR-SEMIPGESHRPNERIRAVVLEVKKMGPR-VRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGGERIEVVRWNDSLQVLVPNA-MQPSEVEDVILCPMLG--RVLVLVRDDQLSLAIGKRGQNVRLASKLVGWDIDVMTREELDQQLDQAVVAYSQIPGVSEELAEGLVSQGFLSFEDLSVIEPDELMEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQE


General information:
TITO was launched using:
RESULT:

Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1577 60298 38.24 170.33
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 38.24
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_4MTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MTN-query.scw
PDB file : Tito_Scwrl_4MTN.pdb: