Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELINGKELAEKMQAEIAEKIQKLKDNGIHPGLVVLLVGENPASQIYVRNKERVAKEIGIHSLVERYPETISEDELLAEIEKYNQDPSFHGILVQLPLPKHIDEEKILLAIRPEKDVDGFHPMNLGRLLAGKPDKIPCTPYGIMKMFEAYSIDPAGKRAVVIGRSNIVGKPMAQLLLMADATVTVAHSKTENLAELAQEADILVVAIGRGHFVTKEFVKPGAVVIDVGMNRDANGKLIGDVKFDEVEPIAGWITPVPKGVGPMTITMLMYQTVKSAEAFGAGE
3NGX Chain:A ((2-270))--KILRGEEIAEKKAENLHGIIER---SGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGIAVDLEKY-DDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYGYHE--NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY-VNDKVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAE------


General information:
TITO was launched using:
RESULT:

Template: 3NGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1471 -186106 -126.52 -691.84
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -126.52
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.670

(partial model without unconserved sides chains):
PDB file : Tito_3NGX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NGX-query.scw
PDB file : Tito_Scwrl_3NGX.pdb: