Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQILGGNNMAFPQLDLKSEKGPKAVIKTNRGDITVQLFPELAPKTVQNFIELS--KKGY-YDGVIFHRVIPDFMIQGGDPTG-TGMGGESIYGESFEDEFSRELFNLR----GALSMANSGPNTNGSQFFIVNNTNVPANMLGQLEGAGFPSEIIEAYKGGGTPWLDFRHTVFGHVLEGMDTVDEIANVQRGPQDRPVHDVVIETIEISE
3RDC Chain:A ((19-143))------------------------------GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE----NFTLKHVGPGVLSMANAGPNTNGSQFFICTIK---------------------------TDWLDGKHVVFGHVIEGMDVVKKI------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 563 26365 46.83 225.34
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 46.83
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_3RDC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RDC-query.scw
PDB file : Tito_Scwrl_3RDC.pdb: