Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------MKKPIQKFFNNEILAYLFFGLATTLVSILSRLVI---YQLSHQELLATALANIIGILFAFITNDTIVFKQKK--KNRLIRLV-----KFSLARLSTFLLDL------FLTFLFVTQFPHII---GQFVTENIDKINAIETIIAQ-----IFIIIINYILSKVYIFRK------------
5TCX Chain:A ((6-232))STKSIKYLLFVFNFVFWLAGGVILGVALWLRHP--NTFYVGIYILIAVGAVMMFVGFLGYGAIQQLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLSSGIRN


General information:
TITO was launched using:
RESULT:

Template: 5TCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 360 -48430 -134.53 -343.48
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -134.53
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.176

(partial model without unconserved sides chains):
PDB file : Tito_5TCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TCX-query.scw
PDB file : Tito_Scwrl_5TCX.pdb: