Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFNSTSWAKYSVIAASLAGVMMLGGCAKKEEHTTTTLNIGYQKYGIL---PILKA-RGDLEKALKDQGVQVKWVEFPAGPQLLEGLNVGSVSLGEAGEAPPIFAQAANPNLVYVANQPAAPKAEALLVQKDSPIQSIKDL-KGKRVALNK-GSNVHYLLLKVLEANHLSLSDIQPVYLPPSDARAAFEKEAVDAWVIWDPFFAAAEHQIQARVLATGENLV--SNHQFYLADRKFAENNPKVLNTVVQTLNQTTQWVSTHQDEAAKLLEKPTALEFDVLKTSISRMGFGVQPISDKVAQEQQYVADAFYAQKLIPNKLTIQEAILKLK
3UN6 Chain:A ((51-333))-----------------------------------QQVIKIGYLPITHSANLMMTKKLLSQYN----HPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALG--HHEGNVIMGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSG-FKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYG---DLTIKPSGYQEITTLVKQHHLFN-PPAYDDFVEPS-


General information:
TITO was launched using:
RESULT:

Template: 3UN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1604 73120 45.59 265.89
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 45.59
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_3UN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UN6-query.scw
PDB file : Tito_Scwrl_3UN6.pdb: