Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSIVYAFVGGLLLGIATVGYLYINGRIAGISGLLAQFISPSRDIFK----SSAFWFIAGLVITPFIYGYFYQPEIEI-------KANSFVLILAGLLVGFGTRLGSGCTSGHGICGMSRLSKRSIIASAIFMFAGMLTVYIIRHVLG--------
2BL2 Chain:A ((1-156))MMDYLITQNGGMVFAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIAFLIFINLGSDMSVVQGLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVISFLLVLNA


General information:
TITO was launched using:
RESULT:

Template: 2BL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 568 -64213 -113.05 -468.70
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -113.05
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.169

(partial model without unconserved sides chains):
PDB file : Tito_2BL2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BL2-query.scw
PDB file : Tito_Scwrl_2BL2.pdb: