Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNALTQELVELLTLEKLEENIYRGISRNLVGKRVFGGQVLGQALRAASYTT-DRPAHSLHAYFLYGGDINAPIIYEVDRLRDGKSFVSRQVRAIQHGRVIFSAMVSFANPEEG-LNYQHPEPDYPAPEALKSESELKEGILNFVPENVRASFMRERHVEIRPIDPVNPFQPQPEAPFNAHYIRTHDRIPKQLEDISLHQAIVAFYSDFTLMTTALRPHGLSYISPSL-QCASIDHAIYFHRPLRADEWMLYDMEATVSAASRGLNFGRMW-QNGQLVCSTVQEGLMRLREIETQ
4R9Z Chain:A ((4-272))---SLGDVLATLELERVGQWRFVGQQLPAPANHILGGHISAQALLAASRTAAGREPHSVHTYFLRPGDSRQPVDFEVVDLQEGRTFSARRVTARQDDKILMEAMSSFKV----QVVYQPIMPEAPSPESL--------------------AS--LRWFERRTIETE-----TVPPARVPMWWRPDGRVPD---DPVLTASLVAYMSAVTLTEPAFAAR------GGVGASAQRDHSVWFHGRAVLSDWLFYDRSSPSSAGSLALASGTMFNRTGELVCTVKQEMYFPP------


General information:
TITO was launched using:
RESULT:

Template: 4R9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1411 -24915 -17.66 -103.38
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -17.66
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_4R9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R9Z-query.scw
PDB file : Tito_Scwrl_4R9Z.pdb: