Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMTEQKSALSLRYFLNLEESQDGFGLVTFGKKQFTRFLTPVISIAIIIWGLYLGFSGVGRYYVALGVFFLVMQGLMRYWLLPMMFKRQFVRYQFGKSEQGIDLYQDYFEFYAAGRKQAVQYSEVQTFAKG-------KLTYMLELKNKTVI-----IVPKRAFAQASDQTIFENTFKK-------------------------------
5TCX Chain:A ((6-232))STKSIKYLLFVFNFVFWLAGGVILGVALWLRHPNTFYVGIYILIAVGAVMMFVGFLGYGAIQQLLGTFFTCLVILFACEVAAGIWGFV---NKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLSSGIRN


General information:
TITO was launched using:
RESULT:

Template: 5TCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 498 -35875 -72.04 -220.09
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -72.04
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.150

(partial model without unconserved sides chains):
PDB file : Tito_5TCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TCX-query.scw
PDB file : Tito_Scwrl_5TCX.pdb: