Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDLFLNRKSFVVKSLAITVTALMMSGANAATSDKEEIRKLRQEVEALKALVQEQRQVQQQQQQVQQQQQVQLAEVKAQPQPAAAPASPLASLKSKTGADVNLYGFVRGDANYIIEGADNDFADVSKSNGKTQDKLRATAKTTRLGLDFTAPV-SGAKVGGKIELDFASSDNDKSENVRIRHAYLTYN-----NWLFGQTTSNFLS-SHAPEMID-FSTNI----G--GGTTRIPQVRYNYKLA----PATQLFVSAEEGNSSATG----DSVKYRLPVLTAKVTQGYADGNGNASARAFVENYKSG----------AGDDKTGWGIAAGTDFKVSDPLKLFADASYVVGNSNYLYGSNSAYTLVNDNIEQNEFVAVQVGGTYKILPNLRSTLAYGAQFADDGTDYAKNNVTANEKVQQAWINFIYTPVKPIDLGVEYVNGKRDTFE----GKSYKDNRVGLMAKYSF
4D65 Chain:F ((5-343))----------------------------------------------------------------------------------------------NKDGNKLDVYGQIDVRHYFADAKS----------------GEDGDDSRVRLGFKGDTQITDQLIGFGRFEWETSTNKAETSNDNQNRLAYAGLKFADYGSLDYGRNYGVIYDTNAWTDVLPLWGADTMDQEDTFMMGRNRNLLTYRNNNGFGYIDGLSFALQYQGKNGDQNKSTGSSALDNNGDGYGFSTAYELG-WGLSIGGG--YSNSSRTPSQNNIKTGATGKRAEAWNVG--SKLELD-ELYLAAMYGQTLNTTRFGD--------DDAEAIANKTENLELVALYSFDFGLTPSIGYNQSKGKNLGNY-----GNKDLVKYIAVGASYDFNKNMAAVIDYKINLLKDNQFTDDYGINTDNVLGLGLIYQF


General information:
TITO was launched using:
RESULT:

Template: 4D65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1624 80610 49.64 266.04
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain F : 0.64

3D Compatibility (PKB) : 49.64
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.096

(partial model without unconserved sides chains):
PDB file : Tito_4D65.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D65-query.scw
PDB file : Tito_Scwrl_4D65.pdb: