Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEKISRRELIQKSLLGFGALSIPVAFTGCNDGSDDESPEIQADFLHGVASGDPLQDKVILWTRVTPTVSGVRLKVVWEISTDNQFKQNLKTGMVETSKTDDFTVKVDAAGLQADTVYYYRFKFGNKVSPVGQTKTLPTSTNKVSFAVCSCSNYPAGY-------FYVYRE----MAKQNVDVIIHLGDYIYEYGADGYATEDAIKLGRNLPADNNKEIIKLNDYRKRYALYRQDKDLKAAHQRHPFIVIWDDHELANDAWREGAENHQSNEGVFSDRKLAALQAYFEWMPIRPVSSTDHLNIYRQFNF------GSLVQLTMLDTRIIARDKQLAYADYMTTTGLDIAKFQADLTNPVRTLMGYTQRDWLVDKLKQSTATWNVVGQQVLMSKMWIPAELLASLGQITSGGTSPDALAKMNAQITELVALKLRLQQNDPTLTAQEKARIMTVAPYNLDAWDGYYAEREFVYDKLAEFNKKIIVLAGDTHNAWASYLYSQKGKYVGVELATSSVSSPGLEKYLSIPLAQLQQFEFAFTTLI-DELVYC---NLNQRGYLLVTLDQVQVHSEWRFVDSIKNTEYQIDSSRQNDIVLDLNLMPLKQGQKTA
5UQ6 Chain:A ((4-292))--------------------------------------------------------------------------------------------------------------------------------------------TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHD---------------------AKDKRFQETFEDVFSD----PSLRNVPWHVLAGNHDHLGNVSAQ-----------I------AYSKISKRWN--------FPSPYYRLRFKIPRSNVS-VAIFMLDTVTLCGNSDD----FV----------SQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIA---------------------------------------------------------------EHGPTHCLVKQLLPLLTTH-KVTAYLCGHDHNLQYLQDEN------GLGFVLSGAGNFMDPSKK-----H-------LRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASG--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1579 -15980 -10.12 -59.63
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -10.12
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_5UQ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UQ6-query.scw
PDB file : Tito_Scwrl_5UQ6.pdb: