Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDSSSAAADAGGAAARSGLHVYSSAQANAAGSGTAALPNKALDHMKHMSRSKSDARRSGSKRTFDEATATDNVQLRRHDGTAVPNTAPNQVVEVVAPPPKKKKVTYALPHQNMEEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVESWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQ-----RYFQNDSGHMCIVMPKYGPCLLDWIMKHGPFNHRHL-----AQIVFQTGVALDYFHSELHLMHTDLKPENILMETSD---------------TTVDPATNRHLPPDP--------CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVILGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE------HLHLMEKTLGRLPSEWAARCGTEEARLLYNSAGQLRPCT--DPKHLARIARARTVRDVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEARQAPSYPDNRAMLRPPPIM
5MY8 Chain:A ((9-381))-----------------------------------------------------------------------------------------------------------------KGGYHLVKIG---DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR----------FLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK--LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL--------------------------


General information:
TITO was launched using:
RESULT:

Template: 5MY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1538 -56649 -36.83 -181.57
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -36.83
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_5MY8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MY8-query.scw
PDB file : Tito_Scwrl_5MY8.pdb: