Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMEMQLMAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKNPLLSSAEIIVSSAVTRALETASYVVCAT----GLPLRVEPLLHEWQVY-KTGIE--NFETARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYRE---------------------------------HQTVVVVAHRMLMRQFVPN-------------------EKIDFCQVIECELEI
3E9D Chain:A ((2-226))-------------------LTFALTIVRHGETQYNRDK--LLQGQG-IDTPLSDTGHQQAAAAGRYLKDLHFTNVFVSNLQRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMANAAGQS---CRDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVPSEADQPVIAGLADDGAQNVPVHALMVSHGAFIRISVRHLVEDLQCCLPAGLKMNQVFSPCPNTGISRFIFT-


General information:
TITO was launched using:
RESULT:

Template: 3E9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 590 -8590 -14.56 -51.75
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -14.56
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_3E9D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E9D-query.scw
PDB file : Tito_Scwrl_3E9D.pdb: