Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MKKSSILFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIFLALFYMIPALYFLFRIGKKWELPKKVLILSLLGGMFLSGWLSSFANTY-----IHDLLGVLFP--DSPFLNAFESAIVAPLVEEPLKLLPLVFV-----LALIPVRKLKFLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIIS--GIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIV------
1R5I Chain:D ((3-216))SMKLR---------------------VENPKKAQKHFVQNLNNVVFTNKELEDIYNLS----NKEETKEVLKLFKLKVNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDG-EVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED


General information:
TITO was launched using:
RESULT:

Template: 1R5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 686 -17606 -25.66 -91.22
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain D : 0.61

3D Compatibility (PKB) : -25.66
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_1R5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R5I-query.scw
PDB file : Tito_Scwrl_1R5I.pdb: