Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV
4K0K Chain:K ((1-116))----------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR-


General information:
TITO was launched using:
RESULT:

Template: 4K0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 556 -40053 -72.04 -345.28
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain K : 0.85

3D Compatibility (PKB) : -72.04
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.681

(partial model without unconserved sides chains):
PDB file : Tito_4K0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K0K-query.scw
PDB file : Tito_Scwrl_4K0K.pdb: