Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRILSVASTERSSRMIKLWRRYKPFINAGVQELITYRVNFILYRIGDVMGAFVAFYLWKAVFDSSQESLIQGFSMADITLYIIMSFV--TNLL----TRSDSSFMIGEEV---------KDGSIIMRLLRPVHFAASYLFTEL--GSKWLIFISVGLPFLSVIVLMKIISGQGIVEVLGLTVLYLFSLTLAYLINFFFNICFGFSAFVFKNLWGSNLLKTSIVAFMSGSLIPLAFFPKVVSDILSFLPFSSLIYTPVMIIVGKYDASQILQALLLQFFWLLVMVGLSQLIWKRVQSFITIQGG
2SCU Chain:A ((1-119))---------------------------------------------------------SIL-IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG-VRMIGP---------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2SCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 476 -19282 -40.51 -189.04
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -40.51
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_2SCU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2SCU-query.scw
PDB file : Tito_Scwrl_2SCU.pdb: