Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSQDNKRKWKNRDLISSLEFAITGIFTAIKEERNMRKHAVTALVVILAGFGFQVSRIEWLFLLLSIFLVVAFEIINSAIENVVD-LASHYHFSMLAKNAKDMAAGAVLVVSLFAALTGALIFLPRIWDLLF
5D6I Chain:A ((19-125))--------------IIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDACTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYH--ELSGRAKDLGSAAVLIAIIDAVITWCILL---------


General information:
TITO was launched using:
RESULT:

Template: 5D6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 251 -35988 -143.38 -339.50
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -143.38
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_5D6I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D6I-query.scw
PDB file : Tito_Scwrl_5D6I.pdb: