Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKIIKEKISSLLSQEEEVLSVEQLGGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFAPFEE------------IKKYESLIEEQIPYAN---YESVRNAVFSLEKRLADLGVDRKSCHIDLVPEN--FIESPQG-RLYLIDWEYSSMNDPMWDLAALFLE-----------------SEFTSQEEET-FLSHYESDQT---PVSHE-----------KIAIYKILQDTIWSLWTVYKEEQGE-DFG--DYGVNRYQRAVKGLASYGGSDEK
3LQ3 Chain:A ((154-385))------------------------------------------------------------------------------------------------IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEP--DSLMLVDFEYSSYNYRGFDIGNHFCEWVYDYTHEEWPFYKARPTDYPTQEQQLHFIRHYLAEAKKGETLSQEEQRKLEEDLLVEVSRYALASHFFWGLWSILQASMSTIEFGYLDYAQSRFQ---------------


General information:
TITO was launched using:
RESULT:

Template: 3LQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 585 14480 24.75 82.27
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 24.75
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_3LQ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LQ3-query.scw
PDB file : Tito_Scwrl_3LQ3.pdb: