Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRTRMSDVKQELIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDINGNVVEGERLPSSEWYMHLIQYQTRDDIDAIIHAHTTYATVLACLREPLPASHYMIAVAGKD-VRVAEYATYGTKELAVNAAKAMEGRRAVLLANHGILAGAQNLLNAFNIVEEVEYCAKIYCLAKNFGEPV-VLPDEEMELMAEKFKTYGQRK
1E4A Chain:P ((1-205))MERNKLA---RQIIDTCLEMTRLGLNQGTG-NVSV--RYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEG-KLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKF-------


General information:
TITO was launched using:
RESULT:

Template: 1E4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 1086 -79164 -72.89 -389.97
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain P : 0.83

3D Compatibility (PKB) : -72.89
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_1E4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1E4A-query.scw
PDB file : Tito_Scwrl_1E4A.pdb: