Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAREQGVVKWFNDTKGFGFIQRNGGDDVFVHFRAIVGDGHRSLRDGQRVEFSVVQGQKGFQAENVQPLD
3PF5 Chain:A ((3-63))-----EGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANV----


General information:
TITO was launched using:
RESULT:

Template: 3PF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 248 -37348 -150.60 -612.26
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -150.60
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.704

(partial model without unconserved sides chains):
PDB file : Tito_3PF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PF5-query.scw
PDB file : Tito_Scwrl_3PF5.pdb: