Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQGFIKAFANLVGWIFALIMGAKYAVLLAPSMSGLSQDPVVQKIAAFAFIALLIIVLTWIVTAFLNGLLKSLKLGPLNRLAGGAFGSLKGLLVVLITMQGVGPWVESSPHWKQSKFIQFLLPYAPLATELSKDAASEAFHQITSGGGVTRTSPKPMDESEETELRPDHSTKDPFY
2BBM Chain:B ((1-26))---------------------------------------------------------------------------------------------------------------------------KRRWKKNFIAVSAANRFKKISSSGAL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2BBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 10 391 39.05 15.02
target 2D structure prediction score : 0.88
Monomeric hydrophicity matching model chain B : 0.46

3D Compatibility (PKB) : 39.05
2D Compatibility (Sec. Struct. Predict.) : 0.88
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_2BBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BBM-query.scw
PDB file : Tito_Scwrl_2BBM.pdb: