Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMCGVVGIAGKSPVNQMLFDALTMLQHRGQDAAGIVTCHEGRLFLRKDNGMVRDVFHTRHMRALLGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLRHMNTDSDSEVLLNVFAHELQKIGTLNPTPEDIFHTVSRVHERCQGAYGVVAMITGHGLVGFRDPNGIRPLIYGSRVTEQGEMEYIIASESVAITALGFKIERDIAPGEAIFINADGELFTKQCAANPKYRPCIFEYVYFARPDAIIDGISVYKARLKMGEKLAHKILRDWGEDHDIDVVIPIPDTSRTSALELANILGVKLREGFMKNRYIGRTFIMPGQQQRKKSVRQKLNPVELEFKGKNVLLVDDSIVRGTTCNEIIQMARDSGAKKVYFASAAPKVMYPNVYGIDMPAKTELIASERSVEEIQEIIGADRLIFQDLEDLKNAVRTSKVPTLTEFDCSVFDGIYVTGGIDADYLNNLEQKRNDSAKKKKDGYIDVNIDAASVDLTGIKEE
3NAG Chain:A ((132-238))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKVKFSDLHANDAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKK-------------HFFIEKKRIDDRTVEMKVPNVDV--NGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSA----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 436 -54456 -124.90 -508.93
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -124.90
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.621

(partial model without unconserved sides chains):
PDB file : Tito_3NAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NAG-query.scw
PDB file : Tito_Scwrl_3NAG.pdb: