Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGLFTLKEVSHYLIENKNMAWSITMCLVAVLLTIFILNLILGLLVHFFDYSEPIWWHALSPYFIALLLFIMVWSVVTELYILRKGGHSLAKQLKARRLVKGESTPEEHAALKITEHLAQTFSLNVPTLYVLPDEVGVNALTAGFHSNDIVIILTWGALQNLDELELYGLLGHEFNQILSGEAVENTKLKILYSGLTTFSQWGSKLAKQGFKRYSPGYKHKFETVFVAVGGVIWLAGSLGVLITRFIKYLTLSGRTFRNDQKTMRLLKNSTNAQTLLRIYVHHSGSQIHSAYSESIAHMCFANSLSPQSWMNIHPSIRERIYELNPTLLQDLQLENLKKLRNRPLFILFHVLEESETEIYTPWSSPQPLPLLRLSPISFALNDAIKPLSSDIRRNKKRPELIQRALQTATGSREVMVAILMIRQYREFIPQDAPVSHAIVDALLNLDGRIHIQIFHDACKNIGHMPASIARQFLTKLALIIQEDGEIGLLDALLLERVKYELNLMPLHLPTAFEEVKPQIVRLIDALLHVQQINSPNQLEVRKRILRSLLNPDEMHIYDEISDEPLDLAEILNDIAGLLLRDRLSILAIVEMCLWSDRIITQDELDVLELLYWRFGFESDEIVEQMQKKNSVMII
2H5N Chain:D ((11-61))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTFSGQELTAIIKMAKSMVMADGKIKPAEIAVMTREFMRFGILQDQVDLLL---------


General information:
TITO was launched using:
RESULT:

Template: 2H5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 107 -25293 -236.38 -495.93
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain D : 0.48

3D Compatibility (PKB) : -236.38
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_2H5N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H5N-query.scw
PDB file : Tito_Scwrl_2H5N.pdb: