Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MIGQQRN---ILATLGIDVWIPRT-QVCQK-NNA-------------HTLWRDQVVEPHESITVPTIDVPAFEQKNTQPQVFEIPKVVEEPPIVVAEVSQPEILVEKPKVIEQE-TITP-FELQAYCLEKCVIFV-DVTALETEEKQLWANIQKAKVGRYSELRWPFPLAA-YQDQRGVGSYIQGFLDAVAAEKKILCLGKCAYIQHANIIHLA-SLKEMLDKP-LLKKRLWQLMQDNNE
2QGN Chain:A ((2-314))KEKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHL--IDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGETPSPYNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYDRGIR----DCQSVQ-AIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRNKANVTWFDMTDVDFDKKIMEIHNFIAGKLEEKSK


General information:
TITO was launched using:
RESULT:

Template: 2QGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 987 26224 26.57 125.47
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 26.57
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.169

(partial model without unconserved sides chains):
PDB file : Tito_2QGN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QGN-query.scw
PDB file : Tito_Scwrl_2QGN.pdb: