Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEKFVDDHHLKRKV---G-TLEMVVAMLLSGSIGLFVIKSGQSPINIVFFRCLISALCLIPICYFYGHFRKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLGALVFHEKLNKNDVLWTIIAFIGLIVIIGLGSASVNSNELVGLGLVLIATT-LYSISVLITKKLSN-TPPLLIVFIQTLSGAIVMAPFISVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVLGVKLHWNIFAVKKVGIRN--------
4O5P Chain:A ((3-813))NFGFHIAPTHPVAGRLTYDSKKLSENILKQQSDERVFSRAQCCKAIHITLGFDGTNNNDKADGSSVSPSCSNVARLIHASIGSGDDINSRGIFKYYCPGVGTVFPDIKEFTPSNMGLIGAEGGENRINWGLVQLVDALFYTLLKSRLKLNDVQGLVEEMSTNWTVSTLTGGLLENGEKKRRAALEPKLKELEEKLRQRQNSGQKPHILAMRLYIYGFSRGAAEARAFANWLQELTRVSDADGRVEYRFAGLPISIEFLGLFDTVAAVGLPFAAGHMDWADDTMRLPDEALPEDCSFLKRCVHLVSCHEQRASFPLDSIRRRDMNGRRTGPSCYRKWTVEYAYPGVHSDVGGGYGVGNQGKAVGGSEFLLSQIALQHMYAEAFEAGAPLQVPEWRVMVPKIEAEFSVSEELATRFNAWQAQAKAGPLEEVIRRETALITAWRIDRYAGGLRNKAFFANVPPDMPEAQQKAWEALHKRRSREYAAAQQLPPMSAAEQAEWDRNVALIGGEDQLRDLRVEKQFDPPLDQRQLLGAAAEFAHDYKGDWGVLDDGMTVGGVIDLLLGGTVFLINEEDEAEEYSQIHRDGSARYHQL------FSAPDRVAPGQ--------------EKLVALFDEQVHDSRA---------PFTDYFRYRLVHFD--NESNKRLSVLATAGRVVGVGV---------------------MLASVGLSVKRRDPRMLLGGL--------------PEISAFD---------------------------------PLTGIALPM---------VGGAALDNLRAFTREPGDKVEQIGQLPPPPPLAVAAVQSPALQQVLLAQQTV


General information:
TITO was launched using:
RESULT:

Template: 4O5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 599 -36495 -60.93 -186.20
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -60.93
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.040

(partial model without unconserved sides chains):
PDB file : Tito_4O5P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O5P-query.scw
PDB file : Tito_Scwrl_4O5P.pdb: