Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRPITAVIHRQALQNNLAVVRKAMPN-SKVFAVVKANAYGHG-IERVYEAFKA-ADGFALLDLEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH------PYPAQFDVFLKMNSGMSRLGFKPQHYVQAWERLNNLANVAKITHMMHFS-------DADGDRFGQQGIDYQITAFEEIVKDLPGERSV---SNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSLRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTARVQFINQV
3UW6 Chain:A ((6-367))--RDTWAEVDLDAIYDNVENLRRLLPDDTHIMASVCGNAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILV-TGASRPADAALAAQQRIALTVFRS---DWLEEASALYSGPFPIHFHLY--MDTGMGSLGVKDEEETK---RI-----VALIERHPHFVLEGLWTWFAT-------YFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDR-TFNMVQFGIAMYGLAPSPG-----PYPLKEAFSLHSRLVHVKKLQPGEKVSFGATYTAQTEEWIGTIPIGYKDGWLR-RLQHFHVLVDGQKAPIVGRILGDMCMIRLPG--PLPVGTKVTLIGRQGDKVI-SIDDVARHLETINYEVPCTISYRVPRI---


General information:
TITO was launched using:
RESULT:

Template: 3UW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1752 -66022 -37.68 -199.46
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -37.68
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3UW6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UW6-query.scw
PDB file : Tito_Scwrl_3UW6.pdb: