Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEFLISTSIVALAEMGDKTQLL-ALLLSACFRKPIPIL-IAILLATLINHGISAVLGQWITTVLSPAILVWVLAVGFIGMAFWMLIPDELDDETASINKWQKFGVFG-ATFILFFLAEIGDKTQIATVALAARYDSIFWVMLGTTLGMMIANAP--AVFIG-NKLAERL----------SIALIH-------KIGAAIFF-------IVGVSTLVQHYFF----
5IOO Chain:A ((2-210))---------EINRKQAKEFYNSDMATALESCQKYGHALFMPELIDAKILATKGSSLLSNW---LTAPSIRATGRTKQGNPVVVYVHVDNYLSNPENIRNAERINGAGVMPVDEFQRLLDLGDNKNVFVID----YDKLKSSSSGVIPVERALEHPQTIPFIGGEERAQRYLEKFKQVYGNNIGIWHCDDLKDEPLGRLLFVGDYCNNGLIGNYGIGNYARFVGVR


General information:
TITO was launched using:
RESULT:

Template: 5IOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 757 -46365 -61.25 -264.94
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -61.25
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.216

(partial model without unconserved sides chains):
PDB file : Tito_5IOO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IOO-query.scw
PDB file : Tito_Scwrl_5IOO.pdb: