Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -MQQSHFDMPEATQAVFNFFFPNGLFYQDSKGGVWE------EGIIVVIELQAIDSNGDPVGSIITINQEIRANNKSQLGRTIYIDLPTAGSFRFRLSRTTATQAGKTQDTCKIKSVYGMADSSISDYGNVTVLRSRTVATDGALSIKERKLNCLVNRKLPLDGTGPLQVTRSAGQALINLALDEHIGRRTSAEVDIAQINAEIAKVKAYFGSDLMSEFNYTIDDDNLSFEEIAGMVASSAFCEPYRFGSLTRFKFEGLQENAVLLFKHRNKVPLTEKRSYTFGVQKDYDGVELEYTSDVDDARVKYIIPEDITPKNPLKITTTGIRNEAQAKVRAWREWNKLRYKYMSCEVEVLDESELLIRNDRILVANNTVVDTQDGEVEAVDGLIIQTSQECTFDVGSDYFIHLQISNATVDVVSCTAGVDKYHVVLSRPPVQPLVVSEDRYVKTLYTLVRADQTEAQAFMLEELTPQTQMTNTLKASNYDARFYERDHDFI 5TC1 Chain:M ((1-393)) MRAFSTLDRENETFVYRSNWTPGRFNSTGAKTKQWHYPSPYSRGALSVTSIFSLDA--RSCYSLFPVSQNLT-----------YIEVPQNVANRASTEVLQKVTQGNFNLGVALAEARSTASQ----------LATQTIALVKAYTAARRG---------------------NWRQALRYLALNED------------------RKFRSKHVAGRWLELQFGWLPLMSDIQGAYEMLTKVHLQEFLPMRAVRQVGTNIKLDG-------QTTCNISRRIVIWFYI---------------NDARLAWLSSLGIL--NPLGIV-----------------WEKVPFSFVVDWL------------------------------LPVGNMLEGLTAPVGCSYMSGTVTDVITGESIIQ------GTAKAQISAMHRGVQSVWPTTGAYVKSPFS----------------------MVHTLDALALIRQRLSR-----

General information: TITO was launched using: RESULT: Template: 5TC1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 1459 -150 -0.10 -0.46 target 2D structure prediction score : 0.33 Monomeric hydrophicity matching model chain M : 0.65 3D Compatibility (PKB) : -0.10 2D Compatibility (Sec. Struct. Predict.) : 0.33 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.134

(partial model without unconserved sides chains): PDB file : Tito_5TC1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5TC1-query.scw PDB file : Tito_Scwrl_5TC1.pdb: