Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFFGFTPSEGLLNDIQTGIAN-KNSS-EPLYPLRDKIALQLNEEIIENVLT---QLVQ---------HFPASEK-----RDTAEKLAGYVKSTVAVLLKQLLSKAPNDVVKQSVEFSEKSLFKDP-QGQYKVGVALDAGLVTNLKHNFAELQAGNDINKAALAELYKQFGDAM-VRHFMSDFNKTL-DLGMIKRKAADIGAAAVTKAVHIAIDKLIPSLNR-TELKAMAEY-HDGLFFN----
4G3A Chain:A ((5-231))KP-----------SDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDS--RDTVREKAQLLLRDLMEHRVLPPQALIDKLATSC-FKHKNAKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVG---DRLRPDLRRMDDVPASKLAMLEQKFDQVKLE


General information:
TITO was launched using:
RESULT:

Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 846 24163 28.56 121.42
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 28.56
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_4G3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G3A-query.scw
PDB file : Tito_Scwrl_4G3A.pdb: