Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQIKAKEEITMAKVCYFTGRKTKSGNNRSHAMNSTKRTVKPNLQKVRVMVDGKPK--KVWVSTRALKSGKVERV
5MLC Chain:Y ((73-128))-------------RICPFTGKKSNKANRVSHSNHKTKRLQFVNLQYKRVWWEAGKRFVKLRLSTKALKT------


General information:
TITO was launched using:
RESULT:

Template: 5MLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Y - contact count / total energy / energy per contact / energy per residue : 142 16130 113.59 298.70
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain Y : 0.71

3D Compatibility (PKB) : 113.59
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_5MLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MLC-query.scw
PDB file : Tito_Scwrl_5MLC.pdb: