Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEEQELQRGLKNRHVQLISIGGAIGTGLFLGSGKSIQLAGPSILLAYLITGCICFFIMRALGE--LLLSNTNNHSFLDFVAEYLGKKAAFITGWTYWFCWVSIAMADLTAIGMYVRYWAPGVPQWLPELIALGLLLCLNMVAVSLFGELEFWFALIKVVAIIAFILVGAYMILTHYTTDI--GTASITNLWSHGGFFPTGAKGFILAFQMVTFAFAGIELVGLVAGETENPEKVLPEAINNIPIRIILFYLG---SLFVIMAIYP------WNSLNPDNSPFVEVFSEIGITIAASLINLVVLSAAASACNSAIYST---------GRMLRSLAQE--GSAPKKFKKLTTHHVPGNAL----TFSTIVIFISVILNYVMPSEVFTLVSSIATTCFLFIWSMLVYTHMKYRKSILGKKAHSFKMPLYPFSNYLVFLY--MAFVCVVLFLGKDTRIALLLT--PVWF---------LLLLLIYHMKYERKK-
4HU8 Chain:A ((3-452))--NEITLTIGQQKDLASMVP-------AKFAGQELSWTSSDPETASVTD-KGIVTALKFSSGGANLFLKAPATGEAIITVTAGKQSHSVKVITTVK--------GKEDIEKL--------PPLKDHFKDYFLIGNIFNNRDVSGSMMDND--WLAHH-----YAILTPENHMKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQ-QIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIG-------SDFVYEAYLAARQADPNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYSWRSGGLPLLFDADNKAKPAYYSFVRAREDYEAAKA


General information:
TITO was launched using:
RESULT:

Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2118 -113495 -53.59 -278.17
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -53.59
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.101

(partial model without unconserved sides chains):
PDB file : Tito_4HU8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HU8-query.scw
PDB file : Tito_Scwrl_4HU8.pdb: