Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------------------------------------------MPKFLSIIR-IRKKAK---TFFVFA---PTKMFQLFSFFIPVFLIFRMTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4R6H Chain:A ((28-421))ADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLI---TDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSET


General information:
TITO was launched using:
RESULT:

Template: 4R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 68 -5811 -85.45 -145.26
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -85.45
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_4R6H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R6H-query.scw
PDB file : Tito_Scwrl_4R6H.pdb: