Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISKKSKDKEELKMTAIYNSVTELIGKTPIVKLNKIVPED--SADVFVKLEFFNPGGSVKDRIALSMIEKAEHDGLLKPGDTIIEPTSGNTGIGLSMVGVAKGYKVIIVMPETMSIERRLLMKGYGAELILTPGA---DGISGSIREAERLAKE--NGYFLPLQFENEANPLVHEKTTGPEIHQAFGVNGLDAFVAGIGTGGTITGAGRELKRVYPKSRINRGRTSRICYFRRERSGTSQNPRNRYRFCS
4COO Chain:A ((94-302))------------KSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILD-QYRNASNPLAHYDTTADEILQQCD-GKLDMLVASVGTGGTITGIARKLKEKCPGCRI------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4COO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 944 35638 37.75 179.09
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : 37.75
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_4COO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4COO-query.scw
PDB file : Tito_Scwrl_4COO.pdb: