Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIQTKLIHGGISEDPTTGAVSVPIYQTSTYRQDGVGQ-----PKQYEYSRSGNPTRFALEELIADLEGGVRGFAFSSGLSGIHA-VFSLFQAGDHILLGDDVYGGTFRLFDKVLTKNGLEYTIIDTSNLDKIEQSIKPNTKALYLETPSNPLLKITDLEKSATLAHQHGLIVIADNTFATPYFQRPLDLGSDIVVHSGTKYLGGHSDVVAGLVTSNHKDLADQIGF--YQNAIGAVLGPQDSWLLQRGIKTLSVRMEEHQKNAFVVADFLFSHPAVEKVYYPGLPDHELHGVAKQQMSGFSGMISFTLKNE-ESAIPFVESLQLFTLAESLGGVESLVEIPSVMTHASIPKEKREEAGIKDGLIRLSVGIEYGQDLINDLAQAFDRIKN
5K30 Chain:A ((11-395))----TQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARF-------RLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYG-THAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGK-QEFIDQARFVGLKDITGG-MSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK---


General information:
TITO was launched using:
RESULT:

Template: 5K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2102 50020 23.80 137.42
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 23.80
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.597

(partial model without unconserved sides chains):
PDB file : Tito_5K30.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K30-query.scw
PDB file : Tito_Scwrl_5K30.pdb: