Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRKVRFFRSVNFKIAITFILILLISIEIIGAYFIRGLERSTINTFIKDMNQTVESLATTISPELNRKDNADDEEVNANIKRFIENSATSDIIEIRVVDEKGIIRGTTDVNEQSAVGKKNDYVDINDFTTKRYVALDNDDKRVNINVQPILSPTGDAVIGALYVKSNIEQKYSEINNTAVIFFTASLIAAFISMIVSVLVARSITQPIGEMREQAIRIARGDYSRKVKVHGQDELGQLADTFNQLAERIEEAQDTMEAERNRLDSVLSHMTDGVIATDRRGKVITINDMAVSLLDIKNEEAIGQSILTLLDIEEEYTLRKLLEDPNEMVLDRSTSTLESDQMILRVDFSMIRRESGFISGLVAVLHDVTEQEKTERERREFVSNVSHELRTPLTSMRSYIEALSEGAWKDEEVAPNFLKVTLDETDRMIRMINDLLNLSRMDTGNTQLQLEYVNFNELVNFVLDRFDMMVGNQEKNYKIRREFTQRDLWVEVDTDKIIQVVDNIMNNAIKYSPDGGTITCRLLETHNNVVLSITDQGLGIPKKDLNRVFERFYRVDKARARAQGGTGLGLAISREVIKAHRGAIWAESKEGKGSTFYISLPYEPYEEEWWE
5LFK Chain:A ((59-293))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLAAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKE-----LERIETEAQRLDSMINDLLVMSRNQQKNA-LVSETIKANQLWSEVLDNAAFEAEQMGKSLTV--NFPPGPWPLYGNPNALESALENIVRNALRYSHT--KIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP----------


General information:
TITO was launched using:
RESULT:

Template: 5LFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 933 -85485 -91.62 -363.77
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -91.62
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_5LFK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LFK-query.scw
PDB file : Tito_Scwrl_5LFK.pdb: