Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDQKDFRENLELKPVTQEHIDQFNELLSYVFQVTEADIEESGFENKRAFIRSKKPILEVSKVFGWFHENKLISQIAIYPCEVNIHG-ARYKMGGVTGVGTYPEYANHGLMQDLIIVALDNMRKNKQWISYLYPYSIPYYRRKGWEIMSDKLSFKIR------DTQLPKQIPVSGMVERLPVD--HPDVFSVYDKFAQQNHGALFRSDFHWEEYWRFENEDERTAAVYYDSNHEPRGVLFYWVAE---EIFHVKEMFYLDQEARNGLWNFISAHFSMIYWVHGDIYKNEPLAFLIEDSQ--IKEQIEPYFMARIVDVKEFLQRFPFVGTADAFHFIIEDPVAPWNNGVFALTWDEQGQVRVLNEPIGKSVRLDIQTLTCLMMNYRRASYLARIERLE-TDEETLKSLERIIPNMEAYFSDYF-
3R1K Chain:A ((29-428))---------VTLCSPTEDDWPGMFLLAAASFT----------DFIGPESATAWRTLVPTDGAVVVRDGSEVVGMALYMDLRLTVPGEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHASEGGIYGRFGYGPATTLHELTVDRRFARFHADAPGGGLGGSSVRLVRPTEHRGEFEAIYERWRQQVPGGLLRPQVLWDELLA-ECKAAPGGDRESFALLHPDGYALYRVDRTDLKLARVSELRAVTADAHCALWRALIGLDSM-ERISIITHPQDPLPHLLTDTRLARTTWRQDGLWLRIMNVPAALEARGY----AHEVGEFSTVLEVSDGGRFALKIGD-GRARCTPTDAAAEIEMDRDVLGSLYLGAHRASTLAAANRLRTKDSQLLRRLDAAFASDVPVQTAFEF


General information:
TITO was launched using:
RESULT:

Template: 3R1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1951 -63802 -32.70 -167.90
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -32.70
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3R1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R1K-query.scw
PDB file : Tito_Scwrl_3R1K.pdb: