Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNLYFTALKSLAIKETNRYLRIWVQTLVPPVITTSLYFV-I-FGKMIGGRIGDMGGFSYMEFIVPGLIMMSAITSSYANVSSSFFSQKFQKNIEEILVAPVPTHVIIWGFVIGGVGRSILVGSLVTIISLF-FV----PLHVYSWFMVIITLLMT----AILFSLAGLLNGIFAQSYDDVSIVPTFVLQPLTYLGGVFYAI------------------------SMLPPFWQAVSKVNPIVYMIS----------GFRYGFLGTIDVPVATSMIVLVLFIVVL----YAVTWYLINKGRGLRS
5CR9 Chain:A ((15-309))----------HFPLTITNCGVDVTFDGPPERIILLESAPVATMRALGVLDSVVLRAGAFPPEYYDAETNAALRAIPSLGEELDS--SGHLQISEEVIIAQQPD---LVLGLPDGVTREGLEAVGINVLVQPTMCPGGVGATTFDDVYEQINTYGRLFDRQDRAAELVASLRQRVAAVEKAVEKRRSAAVLYPTIGGGVGYAYGNESMAHPQLESAGFTNVYADVDERVFEVTLEDVLEQDPDVLVLLHVDGDPDAVKDAVVNLPGADALTAVRNDDILVQLFNFTEPPTPLSVDGLERIHETFGA


General information:
TITO was launched using:
RESULT:

Template: 5CR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1113 -104096 -93.53 -431.93
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -93.53
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.157

(partial model without unconserved sides chains):
PDB file : Tito_5CR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CR9-query.scw
PDB file : Tito_Scwrl_5CR9.pdb: