Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLSVQELSKNFGHKQALSDVSFSLSPGKIVGLVGPNGAGKTTIMKAILGLIHYSDGTICIGENEI--SPSSHKGLEQVGALIEYPGIYPFLTGYDH----LKLFSETNDVSAIDTIVNQ----LKMEKYIHKKAKSYSLGMKQKLGIALALLNHPSIVILDEPMNGLDPQATRDVRKIITDLATQ-GTSFLISSHLLSELEKMVDELILINQGKIIKQCTMAELNQTAQDFIVISTTNDLAARTILTEAGYTLEDPDKIKLLKENEELLGTVIQLLSAQNIHVTDVQHLTNDLESSLLEILDSVKGEEEK
2AWO Chain:A ((2-230))-ASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERG---VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEV--INQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFV-----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2AWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1107 -36624 -33.08 -168.00
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -33.08
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_2AWO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AWO-query.scw
PDB file : Tito_Scwrl_2AWO.pdb: