Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEWQSVFEEWFPKEISKSYPIKISKQYTSSQRWEIYAKLTKKQRELVDKHRRYLISSRFMEEHYLAATDWVFSDFKINPFFRTKRSQQKLYCECGRELKVQYIVKSPKTGKILKLGINHFADHLHVSPTVAASIHQGMTKVDLALDELLWLKQKNIDFPEGLWQKYCFVLYQNRRMKQPYLPDIKLAQRLAEFRQVEMPIYIADYQALENEIKKISEHINGQSKKRQIKKELFDDFAEELVK----DVEEFLINYRAFLR-KDWQSIVYEEVPVHPNAYFETFISVLRKTKRQRTPEVTAQMEYFAKNQRFIQPKIYLFIWKQYCRYGFTEGFFDSIPRIVRNGFLKVLRKEREAIQSADKKDRTVSKEKWQLVVKDIQSGNVQETIDKWKGKHYRFTEAQKQALEYYQKLEESLRFNDEARKYLKELL
5HE1 Chain:A ((98-179))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSATEHVQGHLGKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNV---ELNIH----------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 51 -723 -14.17 -13.14
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -14.17
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_5HE1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HE1-query.scw
PDB file : Tito_Scwrl_5HE1.pdb: