Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEKNLTVIGSYSTREEALSVIERLRN--EGYERDDIVIYTTDEAASRLGFDGLSGIDVETDENRMDGEEDRSLWEKIKDTFSFDTYDSETATPENDPLY-----QYRGDISDGKFVITVKGYRQPETTEDTMDTQDTVSPASTMGTGLETGTGTDPMDVGGTTGFQNTTDPLNMTPGTDPMDVPGETDTMGTSKTEDIDRKPNLDDDTIQLKEE---KLDVNTHD---VTTGEV--DIHKHVVNDTETVEVPVKRE-EIVIERKP---VTDQSSQGTDEKLE-DDTITIPIKEEQVDVSKHTVIREEVGIHKEEHEDVEKVTEDVSREELDIDTSGDVHIEDRNKKS--------
3P4G Chain:A ((23-323))-HSFDHYIGSAFDASNNNVAVTGNVSATLNVLAGDDKVSIDGN-VEDVLVAANVAVLDMGTGNDQLYVAGD--VLGKID------------AGTGNDEIYIKGDVSAAVDAGTGNDEVYIGG--NLSGDLDAGTDNDNIQIGGDVNAALNAGTGNDNLIIG-----HDVSGIVNMGTDNDTVEVGRTINASGKVL-------LDTGDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSGNIQGGTGNDIVRVQSQVWAEANISLGTGDDVLIVEHELHGTVAGNEGDDSIYLKF------------------YTKEQYNNNSDLRNRVANFE-------HIRVSDGVVKGSPADFADY


General information:
TITO was launched using:
RESULT:

Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1899 153779 80.98 563.29
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 80.98
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_3P4G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P4G-query.scw
PDB file : Tito_Scwrl_3P4G.pdb: