Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMPKRQRSDEKAAHHVQLSVESGSRFDAYIRGWMQGTVEQPLLRPSLLPPLTPLPTLAAPSKSGAAQTPATASAATTVGDLSRLCEWTPPSAVMPASRTAVVYDTSMLDHVSPD---------------AGDYERPARLQSTLDHLTVIGLLPCCQRIPARTAKKHELRRVHCRELIDTVDQLDFFMGIQEGRGSVIGQDLFASEHTSRAARMAAGCVIEAVKAVLSGAATNAFAIVRPPGHHAGPANAAGYCLYNNVAVAARAAQAELAAAQAEHNPAGDAQQPRILILDWDVHHCDGTESIFYDDPSVLVISLHQYGNGHGHVLRKVSSAAAKNPAEISTPSKEAITADDLAALLSGGAIEPPPVSAPEASRPEAASDPPQGSTEGRRVRAAVDYNSLAAQIEEEGDAEIAALFGVDLNAASTSSSNSSSASTSSSVSADSTSVARNGTRPVHYAGDTVGVSFDETPRQRATGAEEEELFYPGTGHLNRVGGDATPAAQGRNINIPWPTHGMGDLEYLQLLHEVVLPAAREFRPELVLISCGFDSASGDLLGSMCLTPSGYYIMTRLMAQN----F-PKLVVALEGGYNVRNVALCSEAVMRALLESSGCPGDRLPKSR-MLWCQASSLVADIKRMHAPYWSCFSPNM
5G1B Chain:A ((3-369))-------------------------------------------------------------------------------------------------HAIGYVWNTLYGWVDTGTGSLAAANLTARMQPISHHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAHLENMKRVSNLPT----GGDTGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIFNNTSVAAGYARAV-L------------GMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQHL-----------------------------------------------------------------------------------------------------------------------------------------------------------------CFPPDSGYSTERGAG---NGHGYNINVPLPPG-SGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGVRSLP---DPYHEFLAGMGGNTLLDAERAAIEEIVPLLAD--


General information:
TITO was launched using:
RESULT:

Template: 5G1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2298 -98348 -42.80 -284.24
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -42.80
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_5G1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G1B-query.scw
PDB file : Tito_Scwrl_5G1B.pdb: