Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWFFGAIGRSDAEKQLLYSENKTGSFLIRESESQKGEFSLSVLDGAVVKHYRIKRLDEGGFFLTRRRIFSTLNEFVSHY
1JYQ Chain:B ((5-80))WFFGKIPRAKAE-EMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVK-FNSLNELVDYH


General information:
TITO was launched using:
RESULT:

Template: 1JYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 275 -43395 -157.80 -570.99
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -157.80
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.752

(partial model without unconserved sides chains):
PDB file : Tito_1JYQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JYQ-query.scw
PDB file : Tito_Scwrl_1JYQ.pdb: