Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISKRLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAERILEEAGKFYEILVVEAGQMKLSASDVRFGPFLSKEVSPVFVQKWQKEAEKLEFALGQIPEKNLEERQVLVDKIQAIKEVLHVSK
3KU1 Chain:A ((1-222))MISKRLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAGQMKLSASDVRFGPFLSKEVSPVFVQKWQKEAEKLEFAL--------EERQVLVDKIQAIKEVLH---


General information:
TITO was launched using:
RESULT:

Template: 3KU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1096 -139626 -127.40 -652.46
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.98

3D Compatibility (PKB) : -127.40
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_3KU1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KU1-query.scw
PDB file : Tito_Scwrl_3KU1.pdb: